Max Planck Institute for Molecular Genetics
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[back to Vertebrate Genomics] Kinetic Modelling Group

KMedDB

KMedDB enables you to search Pubmed abstracts for key words related to enzyme kinetic parameters. For querying KMedDB, please choose a type of kinetic constant. In addition, you can specify other entities, which have to appear in the abstracts (Enzyme: KEGG Identifier (EC-Number), Compound: KEGG Identifier, Species: NCBI Taxonomy Identifier). If you leave these fields open, you may obtain a large number of hits, and processing the query will take a while. At least you have to submit one other field.
KMedDB has been developed by the Kinetic Modeling Group of the Max Planck Instiute for Molecular Genetics in corporation with the Knowledge Management in Bioinformatics Group of the Humboldt-University. Part of this work has been done in cooperation with the Rebholz-Group, EBI Hinxton. For questions and/or remarks, please contact Sebastian Schmeier. Want to know more about KMedDB and how it works: >>>

CONSTANT        ENZYME (EC)
COMPOUND (KEGG-ID)        SPECIES (NCBI-ID)

Press here for a example request.


Some selected Identifiers:
Compound KEGG-ID Species NCBI-TaxID
ATP C00002 Homo sapiens 9606
NADH C00004 Mouse 10090
Glucose C00293 E. coli 592
Alcohol C00069 S. cerevisiae 4932
A. thaliana 3702
C. elegans 6239
D. melanogaster 7227

Have a look at the sister application:
Kinetikon

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